BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036G09LP1|AL430287
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1463 1697 0.0
>3x_Contig1463
Length = 9363
Score = 1697 bits (850), Expect = 0.0
Identities = 905/928 (97%), Gaps = 2/928 (0%)
Strand = Plus / Minus
Query: 1 gatccatctagtgatgacatcaatcgatacccaattttatacatttctaatgcggaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6673 gatccatctagtgatgacatcaatcgatacccaattttatacatttctaatgcggaaata 6614
Query: 61 gagtcacgaattgcaaagttgaaagaatgtgtttcgagtctacgaagaaatgatgggcca 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6613 gagtcacgaattgcaaagttgaaagaatgtgtatcgagtctacgaagaaatgatgggcca 6554
Query: 121 caatctgaatccmtaatgtatgctatcaaaaacatcgagtttgaaatccagactttaaat 180
|||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 6553 caatctgaatccataatgtatgctatcaaaaccatcgagtt-gaaatccagactttaaat 6495
Query: 181 aataaattggcacggccttgtatcamccatgaactcaccagtcatccagaattgaacaga 240
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 6494 aataaattggcacggccttgtatcaaccatgaactcaccagtaatccagaattgaacaga 6435
Query: 241 gataaatctgtttgctttgaggctaaattgatgaaaaatcatgaaagtnactatgtcagt 300
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 6434 gataaatctgtttgctttgaggctaaattgatttaaaatcatgaaagtaactatgtcagt 6375
Query: 301 ttgaatcgatacgtcaagatcaataccaataaactcgaag-gtatttgcmaaagcctccm 359
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 6374 ttgaatcgatacgtcaagatcaataccaataaactcgaagagtatttgcaaaagcctcca 6315
Query: 360 atggtagatgttaaacatggattatatttcccmggtcagtggttatcattaagaggtgtt 419
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6314 atggtagatgttaaacatggattatatttcccaggtcagtggttatcattaagaggtgtt 6255
Query: 420 ggttatttcgtgaaagattttatgaaacatgccaagtgcmatataamagagttaaaggaa 479
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 6254 ggttatttcgtgaaagattttatgaaacatgccaagtgcaatataaaagagttaaaggaa 6195
Query: 480 aacatatatctcattctacggcaatttgatataatgtctgctgtggaaatcaaamatgct 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6194 aacatatatctcattctacggcaatttgatataatgtctgctgtggaaatcaaaaatgct 6135
Query: 540 gaatgttggggagctcctgttgaactttattgtcagamtttttctgttaaagtacgacaa 599
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 6134 gaatgttggggagctcctgttgaactttattgtcagaatttttctgttaaagtacgaaaa 6075
Query: 600 gatgaaagagttcagcatttgctgcgtnacatacccgcttccttattgaataaggtgatt 659
||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 6074 gatgaaagagtacagcatttgctgcgtaaaatacccgcttccttattgaataaggtgatt 6015
Query: 660 gctaccaaatcggcatttaaactggaaaactggaatcatatcattaataatacttctgaa 719
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6014 gctaccaaatcggaatttaaactggaaaactggaatcatatcattaataatacttctgaa 5955
Query: 720 acatcggtatcgtctgctaccgatgctttccattggatcattgctataatggaagtgaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5954 acatcggtatcgtctgctaccgatgctttccattggatcattgctataatggaagtgaat 5895
Query: 780 aagaatgagtatcaaaaattaagcaagcmtcataaactttccgctcaacaaaggggtgat 839
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5894 aagaatgagtatcaaaaattaagcaagcatcataaactttccgctcaacaaaggggtgat 5835
Query: 840 gatattatcacggaaaccctattttttattgaagctgaggagcttctgttcactttgggc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5834 gatattatcacggaaaccctattttttattgaagctgaggagcttctgttcactttgggc 5775
Query: 900 cttcacttctttaagcaaatcagtattg 927
||||||||||||||||||||||||||||
Sbjct: 5774 cttcacttctttaagcaaatcagtattg 5747
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6907
Number of Sequences: 1807
Number of extensions: 6907
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)